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Liste des publications en date de janvier 2012 Me contacter par courriel si vous voulez un fichier PDF d'un article (si disponible...). Je ne donne plus des copies papiers. Publication list up to January 2012. Please contact me by email if you want a PDF of a paper (if available...). I don't give out paper copies anymore. Books
Shipley, B. 2010.
From plant traits to vegetation structure. Chance and selection in
the assembly of ecological communities.
Cambridge University Press: Cambridge UK.
More details here.
Shipley, B. 2000.
Cause and
Correlation in Biology: A User’s Guide to Path Analysis, Structural
Equations and Causal Inference. Cambridge University Press: Cambridge UK.
Shipley, B.
2002.
Cause and Correlation
in Biology: A User’s Guide to Path Analysis, Structural Equations and
Causal Inference.
2nd Edition. Cambridge University Press: Cambridge UK.
Articles avec arbitrage/ Peer-review
articles *étudiants (SVP respecter les droits d'auteur si
vous téléchargez ces articles!)
1.
Lachapelle*, P.-P. &
Shipley, B. (2012).
Interspecific prediction of photosynthetic-light response curves using
specific leaf mass and leaf nitrogen content: effects of differences in
soil fertility and growth irradiance.
Annals of Botany (sous presse).
2.
Laliberté,
E.*, Shipley.
B., Norton, D.A.
& Scott, D. (2012). Which plant traits determine abundance under
long-term shifts in soil resource availability and grazing intensity?
Journal of Ecology (sous presse).
3.
Shipley, B.,
Paine, C.E.T. & Baraloto, C. (2012). Quantifying the importance of local
niche-based and stochastic processes to tropical tree community assembly.
Ecology (sous presse).
4.
Douma*, J.C. ,
Shipley, B., Witte, J.P.M., Aerts, R. & van Bodegom, P.M. (2012).
Disturbance and
resource availability act differently on the same suite of plant traits;
revisiting assembly hypotheses.
Ecology (sous presse)
5.
Frenette-Dussault*, C.,
Shipley, B., Léger, J.-F.,
Meziane, D. & Hingrat, Y. (2011). Functional structure of an arid steppe
plant community reveals similarities with Grime’s C-S-R theory.
Journal of Vegetation Science
(sous press).
6.
Aulen*, M.,
Shipley, B., Bradley, R. 2012. Prediction of in situ root
decomposition rates in an interspecific context from chemical and
morphological traits.
Annals of Botany
109 :287-297.
7.
Sonnier*, G.,
Shipley, B., Fayolle, A., Navas, M.-L. 2012. Quantifying trait
selection driving community assembly: A test in herbaceous plant
communities under contrasted land use regimes.
Oikos (sous presse).
8.
Hodgson,
J.G., Montserrat-Martí, G., M. Charles, M., Jones, G., Wilson, P.,
Shipley, B.,, Sharafi, M., Cerabolini, B.E.I., J. H.
C. Cornelissen,
J.H.C., Band, S.R.,
Bogard, A., Castro-Díez, P., Guerrero-Campo, J.,
Palmer, C., Pérez-Rontomé, M.C., Carter, G., A. Hynd, A.,
A. Romo-Díez, A., L. de Torres Espuny, L., Royo Pla, F. (2011). Is leaf
dry matter content a better predictor of soil fertility than specific leaf
area? Annals of Botany
108 : 1337-1345.
9.
Katgge, J.,
Shipley, B., 121 others. (2011) TRY - a global database of plant
traits. Global Change Biology
17:2905-2935.
10.
Shipley, B.,
Laughlin, D.C., Sonnier*, G. & Otfinowski*, R. (2011). A strong test
of a maximum entropy model of trait-based community assembly.
Ecology 92:507-517.
11.
Sonnier*, G.,
Shipley, B. & Navas, M.-L. (2010). Quantifying relationships between
traits and explicitly measured gradients of stress and disturbance in
early successional plant communities. Journal of Vegetation Science
21:1014-1024.
12.
Useche*, A. &
Shipley, B. (2010). Plasticity in relative growth rate after a
reduction in nitrogen availability is related to root morphological and
physiological responses. Annals of Botany 106 :617-625.
13.
Bergeron, P.*,
Grignolio, S.,Apollonio, M., Shipley, B. & Festa-Bianchet. M.
(2010). Secondary sexual characters signal fighting ability and determine
social rank in Alpine ibex (Capra ibex). Behavioral
Ecology and Sociobiology. 64:1299-1207
14.
Shipley, B.
(2010). Community assembly, natural selection, and maximum entropy
models. Oikos 119:604-609.
15.
Sonnier*, G.,
Shipley, B. & Navas, M.-L. (2010). Plant traits, species pools
and the prediction of relative abundance in plant communities: a maximum
entropy approach. Journal of Vegetation Science 21:318-331.
16.
Useche*, A. &
Shipley, B. (2010). Interspecific correlates of plasticity in relative
growth rate following a decrease in nitrogen availability. Annals
of Botany 105:333-339.
17.
Loranger*, J. &
Shipley, B. (2010). Interspecific covariation between stomatal density
and other functional leaf traits in a local flora. Botany 88:30-38.
18.
Marino*, G., Aqil,* M.
& Shipley, B. (2010).The leaf economics spectrum and the prediction
of photosynthetic light response curves. Functional Ecology
24:263-272.
19.
Thomas, D.W., Bourgault*,
P. Shipley, B., Perret, P. & Blondel, J. (2010).
Context-dependent changes in the weighting of environmental cues that
initiate breeding in a temerate passerine, the Corsican Blue Tit.
Auk 127:129-139.
20.
Shipley B.
2009. Trivial and non-trivial applications of entropy maximization in
ecology: Shipley's reply. Oikos 118: 1279-1280.
21.
Kang, C. & Shipley,
B. (2009). A correction note on "A new inferential test for path
models based on directed acyclic graphs". Structural Equation
Modeling 16:537-538.
22.
Dubois*, Y., Blouin-Demers,
G., Shipley, B. & Thomas, D. (2009). Thermoregulation and
habitat selection in wood turtles (Glyptemys insulpta): chasing the
sun slowly. Journal of Animal Ecology 78:1023-1032.
23.
Shipley, B.
(2009). Limitations of entropy maximization in ecology : a reply to
Haegeman and Loreau. Oikos 118:152-159
24.
Shipley, B.
(2009). Confirmatory
path analysis in a generalized multilevel context. Ecology
90:363-368.
25.
Saura-Mas*, S.,
Shipley, B. & Lloret, F. (2009). Testing leaf trade-offs in
Mediterranean woody species: Post-fire regenerative strategy links water
regulation and leaf dry matter content. Functional Ecology
23:103-110.
26.
Thomas, D.W.,
Shipley, B., Blondel, J., Perret, P., Simon*, A. & M.
M. Lambrechts, M.M. (2007). Common paths link food abundance and
ectoparasite loads to physiological performance and recruitment in
nestling Blue Tits. Functional Ecology 21:947-955.
27.
Niklas, K.J., Cobb,
E.D., Niinemets, U., Reich, P.B., Sellin, A., Shipley, B., &
Wright, I.J. (2007). Evidence for “breaking even” and “diminishing
returns” in the scaling of functional leaf traits across and within six
species-groups. Proceedings of the National Academy of Science
104:8891-8896.
28.
Shipley, B.,
Vile, D.*, & Garnier, E. (2007). A response to technical comments
on: "From plant traits to plant communities: A statistical mechanistic
approach to biodiversity". Science 316: 1425.
29.
Shipley, B.
(2007). Comparative plant ecology as a tool for integrating across scales.
Annals of Botany 99:965-966.
30.
Shipley, B.,
Vile, D.*, & Garnier, E. (2006). From plant traits to plant communities: a
statistical mechanistic approach to biodiversity. Science
314:812-814.
31.
Lamarche, L*.,
Bradley, R.L., Hooper, E., Shipley, B., Simao-Beaunoir, A.-M.. & C.
Beaulieu, C. (2007). Forest floor bacterial community composition and
catabolic profiles in relation to landscape features in Quebec’s southern
boreal forest. Microbial Ecology 54: 10-20. .
32.
Shipley, B.
(2006). Net assimilation rate, specific leaf area and leaf mass ratio:
which is most closely correlated with relative growth rate: A
meta-analysis. Functional Ecology 20:565-574.
33.
Vile*, D., Shipley,
B. & Garnier, E. (2006). Ecosystem productivity can be predicted from
abundance-weighted measures of potential relative growth rate.
Ecology Letters 9:1061-1067.
34.
Shipley, B.,
Lechowicz, M.J., Wright, I. & Peter B. Reich, P.B. (2006). Fundamental
tradeoffs generating the worldwide leaf economics spectrum .
Ecology 87:535-541.
35.
Kazakou, E., Vile*, D.,
Shipley, B., Gallet, C. & Garnier, E. (2006). Covariation in litter
decomposition, leaf traits and plant growth in species from a
Mediterranean old-field succession. Functional Ecology
20:21-30.
36.
Vile*, D., Shipley,
B. & Garnier, E. (2006). A structural equation model to integrate
changes in functional strategies during old-field succession .
Ecology 87:504-517.
37.
Bradley, R.L.,
Beaulieau, C, & Shipley, B. (2006). Refining numerical approaches
for analyzing soil microbial community metabolic profiles based on carbon
source utilization patterns. Soil Biology & Biochemistry
38:629-632.
38.
Prévost*, K., Couture, G., Shipley, B.,
Brzezinski, R., & Beaulieu, C. (2006).
Effect of chitosan and
of a biocontrol streptomycete on field and potato tuber bacterial
communities. BioControl 51:533-546.
39.
Vile* D, Garnier E,
Shipley B, Laurent G, Navas M-L, Roumet C, Lavorel S, Díaz S, Hodgson
JG, Lloret F, Midgley GF, Poorter H, Rutherford MC, Wilson PJ, Wright IJ.
(2005). Specific Leaf Area and Dry Matter Content Estimate Thickness in
Laminar Leaves. Annals of Botany 96: 1137-1140..
40.
Chbouki, S.,
Shipley, B. & Bamouh, A. (2005). Path models for the abscission of
reproductive structures in three contrasting cultivars of Faba bean (Vicia
faba L.). Can. J. Bot. 83: 264-271.
41.
Shipley, B.,
Vile*, D., Garnier, E., Wright, I.J. & Poorter, H. (2005).
Functional linkages between leaf traits and net photosynthetic rate:
reconciling empirical and mechanistic models. Functional Ecology
19:602-615.
42.
Grenon*, F., Bradley,
R.L., Jones, M., Shipley, B., Peat, H. (2005) Soil factors
controlling mineral N uptake by Picea engelmannii seedlings: the
importance of gross NH4+ production rates. New Phytologist 165:
791-800.
43.
Lapointe*, B., Bradley,
R.L., Shipley, B. (2005). Mineral nitrogen and microbial dynamics
in the forest floor of clearcut or partially harvested successional boreal
forest stands. Plant & Soil 271: 27-37.
44.
Shipley, B.
(2004). Analysing the allometry of multiple interacting traits.
Perspectives in Plant Ecology, Evolution and Systematics 6:
235-241.
45.
Almeida-Cortez*, J.,
Shipley, B. & Arnason, J.T. (2004). Effects of nutrient
availability on the production of pentaynene, a secondary compound related
to defense, in Rudbeckia hirta. Plant Species Biology
18:85-89.
46.
Almeida-Cortez*, J.S.;
Shipley, B. & Arnason, J.T. (2004) - Growth and chemical defense in
relation to resource availability: tradeoffs or common responses to
environmental stress? Brazilian Journal of Biology 64:187-194.
47.
Von Hardenberg*, A.,
Shipley, B. & Festa-Bianchet, M. (2003) Another one bites the dust:
Does incisor arcade size affect mass gain and survival in grazing
ungulates? Canadian Journal of Zoology 81:1623-1629.
48.
Shipley, B.
& Almeida-Cortez*, J. (2003). Interspecific consistency and
intraspecific variability of specific leaf area with respect to irradiance
and nutrient availability. Écoscience 10: 74-79.
49.
Shipley, B.
(2003). Testing recursive path models with correlated errors using
d-separation. Structural Equation Modeling 10: 214-221.
50.
Hunt, R., Causton,
D.R., Shipley, B., & Askew, A.P. (2002). A modern tool for
classical growth analysis. Annals of Botany 90:
485-488.
51.
Shipley, B.
(2002). Tradeoffs between net assimilation rate and specific leaf area in
determining relative growth rate: the relationship with daily irradiance.
Functional Ecology 16: 682-689.
52.
Dawid AP, Cox DR,
Kreiner S, Green P, Shipley B, Kent JT, Smith JQ, Koster JTA,
Madigan D, Andersson SA, Perlman MD, Robert CP, Marin JM, Rosenbaum PR,
Roverato A, Consonni G, Studeny M. (2002). Chain graph models and their
causal interpretations - Discussion on the paper by Lauritzen and
Richardson. Journal of the Royal Statistical Society Series G –
Statistical Methodology 64: 348-361 Part 3.
53.
Shipley, B.
(2002). Start and stop rules for exploratory path analysis.
Structural Equation Modeling 9:554-561.
54.
Shipley, B.
& Meziane*, D. (2002). The balanced growth hypothesis and the allometry of
leaf and root biomass allocation. Functional Ecology 16:
326-331.
55.
Shipley, B.
& Thi-Tam*, V. (2002). Dry matter content as a measure of dry matter
concentration in plants and their parts. New Phytologist 153:
359-364.
56.
Almeida-Cortez*, J. S.
& Shipley, B. (2002). No significant relationship between seedling
relative growth rate under nutrient limitation and potential tissue
toxicity. Functional Ecology 16: 122-127.
57.
Garnier, E.,
Shipley, B., Roumet, C. & Laurent, G. (2001). A standardized protocol
for the determination of specific leaf area and leaf dry matter content.
Functional Ecology 15 : 688-695.
58.
Meziane*, D. &
Shipley, B. (2001). Direct and indirect relationships between specific
leaf area, leaf nitrogen and leaf gas exchange : effects of irradiance and
nutrient supply. The Annals of Botany 88 : 915-927.
59.
Shipley, B. (2000).
Plasticity in relative growth rate and its components following a change
in irradiance. Plant, Cell and Environment 23 :1207-1216.
60.
Shipley, B.
& Lechowicz, M. (2000).
The functional co-ordination of leaf morphology, nitrogen concentration
and gas exchange in 40 wetland species. Ecoscience 7 :
183-194.
61.
Shipley, B.
(2000) A permutation
procedure for testing the equality of pattern hypotheses across groups
involving correlation or covariance matrices. Statistics and Computing
Journal 10: 253-257.
62.
Shipley, B. (2000).
A new inferential test for path models based on directed acyclic graphs.
Structural Equation Modeling 7:206-218.
63.
Almeida-Cortez*, J.,
Shipley, B. & J. T. Arnason. (1999) Do plant species with high
relative growth rates have poorer chemical defences? Functional Ecology
13 : 819-827.
64.
Pyankov, VI.,
Kondratchuk, A. & Shipley, B. (1999). Leaf structure and specific
leaf mass: the alpine desert plants of the Eastern Pamirs (Tadjikistan).
The New Phytologist 143: 131-142.
65.
Shipley, B.
(1999). Testing causal
explanations in organismal biology: causation, correlation and structural
equation modelling. Oikos 86: 374-382.
66.
McKenna*, MF. &
Shipley, B. (1999). Interacting determinants of interspecific relative
growth rate: empirical patterns and a theoretical explanation.
Ecoscience 6: 237-247.
67.
Meziane*, D. &
Shipley, B. (1999). Interacting components of interspecific relative
growth rate: constancy and change under differing conditions of light and
nutrient supply. Functional Ecology 13:611-622.
68.
Meziane*, D. &
Shipley, B. (1999). Interacting determinants of specific leaf area in
22 herbaceous species: effects of irradiance and nutrient availability.
Plant, Cell & Environment 22: 447-459
69.
Shipley, B.
(1997). Exploratory
path analysis with applications in ecology and evolution. The American
Naturalist 149:1113-1138.
70.
Keddy, PA.,
Twolan-Strutt, L. & Shipley, B. (1997). Experimental evidence that
interspecific competitive asymmetry increases with soil productivity.
Oikos 80:253-256.
71.
Shipley, B.
& Hunt, R. (1996).
Regression smoothers for estimating parameters in growth analysis.
Annals of Botany 78:569-576.
72.
Visman, V., Pesant, S.,
Dion*, J., Shipley, B. & Peters, R. (1996). Joint effects of
maternal and offspring sizes on clutch mass and fecundity in plants and
animals. Ecoscience 3:173-182.
73.
McCanny, S.J.,
Hendershot, W., Lechowicz, M.J. & Shipley, B. (1995).The effects of
aluminium on Picea rubens: factorial experiments using sand
culture. Canadian Journal of Forestry Research 25:8-17.
74.
Shipley, B.
(1995). Structured
interspecific determinants of specific leaf area in 34 species of
herbaceous angiosperms. Functional Ecology 9:312-319.
75.
Reader, R.J., Wilson,
S.D., Belcher, J.W., Wisheu, I. Keddy, P.A., Tilman, D., Morris, E.C.,
Grace, J.B., McGraw, J.B., Olff, H. Turkington, R., Klein, E., Leung, Y.,
Shipley, B., van Hulst, R., Johansson, M.E., Nilsson, C., Gurevitch,
J., Grigulis, K. & Beisner, B.E. (1994). Intensity of plant competition in
relation to neighbor biomass: an intercontinental study with Poa
pratensis. Ecology 75:1753-1760.
76.
Shipley, B.
& Keddy, P.A. (1994)
Evaluating the evidence for competitive hierarchies in plant communities.
Oikos 69:340-345.
77.
Shipley, B.
(1993). A null model
for competitive hierarchies in competition matrices. Ecology 74:1693-1699.
78.
Shipley, B.,
Lechowicz, M., Hendershot, W.H. & Dumont, S. (1992). The interactive
effects of nutrient concentration, solution pH-Al concentration and CO2
concentration on the growth and vitality of Red Spruce (Picea rubens
Sarg.) seedlings in relation to forest decline. Water, Soil and Air
Pollution 64:585-600.
79.
Shipley, B.
& Dion, J. (1992). The
allometry of seed production in herbaceous angiosperms. The American
Naturalist 139:467-483.
80.
Shipley, B.,
Keddy, P.A., Gaudet, C. & Moore, D.R.J. (1991). A model of species density
in shoreline vegetation. Ecology 72: 1658-1667.
81.
Shipley, B.
& Peters, R.H. (1991).
The seduction by mechanism: A reply to Tilman. The American Naturalist
138: 1276-1282.
82.
Shipley, B.
& Parent, M. (1991).
Germination responses of 64 wetland species in relation to seed size,
minimum time to reproduction and seedling relative growth rate.
Functional Ecology 5: 111-118.
83.
Shipley, B.,
Keddy, P.A. & Lefkovitch, L.P. (1991). Mechanisms producing plant zonation
along a water depth gradient: a comparison with the exposure gradient.
Canadian Journal of Botany 69: 1420-1424.
84.
Shipley, B.
& Peters, R.H. (1990).
The allometry of seed weight and seedling relative growth rate.
Functional Ecology 4: 523-529.
85.
Shipley, B.
& Peters, R.H. (1990).
A test of the Tilman model of plant strategies: relative growth rate and
biomass partitioning. The American Naturalist 136: 139-153.
86.
McCanny, S.J., Keddy,
P.A., Arnason, T.J., Gaudet, C.L., Moore, D.R.J. & Shipley, B.
(1990). Fertility and the food quality of wetland plants: a test of the
resource availability hypothesis. Oikos 59: 373-381.
87.
Keddy, P.A. &
Shipley, B. (1989) Competitive hierarchies in herbaceous plant
communities. Oikos 54: 234-241.
88.
Shipley, B.
(1989). The use of
above-ground maximum relative growth rate as an accurate predictor of
whole-plant maximum relative growth rate. Functional Ecology 3:
771-775.
89.
Shipley, B.,
Keddy, P.A., Moore, D.R.J. & Lemky, K. (1989). Regeneration and
establishment strategies of emergent macrophytes. Journal of Ecology
77: 1093-1110.
90.
Shipley, B.
& Keddy, P.A. (1988).
The relationship between relative growth rate and sensitivity to nutrient
stress in twenty-eight species of emergent macrophytes. Journal of
Ecology 76: 1101-1110.
91.
Shipley, B.
(1987). The
relationship between dynamic game theory and the Lotka-Volterra
competition equations. Journal of Theoretical Biology 125:
121-123.
92.
Van Hulst, R.,
Thériault, A. & Shipley, B. (1987). Why is Rhinanthus minor (Scrophulariaceae)
such a good invader? Canadian Journal of Botany 65:
2373-2379.
93.
Shipley, B.
& Keddy, P.A. (1987).
The individualistic and community-unit concepts as falsifiable hypotheses.
Vegetatio 69: 47-55.
94.
Van Hulst, R.,
Thériault, A. & Shipley, B. (1986). The systematic position of the
genus Rhinananthus (Schrophulariaciae) in North America. Canadian
Journal of Botany 64: 1443-1449. Chapitres de livres/ Book chapters
1.
Shipley, B. (2009).
Entropy
Maximization and Species Abundance. Dans: Meyers, Robert (Ed.)
Encyclopedia of Complexity and Systems Science, Vol 3, pp 2903-2918.
Springer, New York.
2.
Shipley, B.
(2003). From biological hypotheses to structural equation models : The
imperfection of causal translation. Dans Pugesek, B., Tomer, A. & von Eye,
A. (éditeurs). Structural equation modeling : Applications in
ecological and evolutionary biology research. Cambridge University
Press, Cambridge UK.
3.
Fortin, M.-J., Jacquez, G. M. & Shipley, B.
(2001). Computer intensive sampling in ecology. Dans El-Shearawi &
Piegorsch (editeurs). Encylopedia of environmetric. John Wiley & Sons,
Chichester.
4.
Shipley, B.
(1999). Exploring hypothesis space: Examples from organismal biology. Dans
Glymour, C. & Cooper, G. (éditeurs). Computation, Causation and
Discovery. AAAI/MIT Press.
5.
Shipley, B.
& Meziane, D. (1998) The statistical modelling of plant growth and its
components using structured equations. Dans Lambers, H. Poorter, H. & van
Vuuren, M. (éditeurs). Variation in growth rate and productivity of
higher plants. Backhuys Publishers, Leiden, The Netherlands.
6.
Keddy, P.A ., Wisheu,
I., Shipley, B. & Gaudet, C. (1989) Seed banks and vegetation
management for conservation. Dans : (Leck, M.A., Parker, V.T. et
Simpson, R.L. (éditeurs).
The Ecology of Soil Seed Banks.
Academic Press.
Revues de livres sur invitation/
Invited book reviews Shipley, B. (1994). Revue de Ricklefs, R.E. &
Shluter, D. (1993). Écoscience 1 :359-360. Shipley, B. (1997). Revue de Bazzaz F.A.
(1996). Écoscience 4 :564. Shipley, B. (2000). Revue de Pearl, J. (2000).
Structural Equation
Modeling
7 : 652-654.
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